MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Bacteroides acidifaciens
8_33DSS_C5_S8
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 484
bases: 5,219,070 bps
CDS: 4,342
rRNA: 5
Repeat region:
tmRNA: 1
tRNA: 67
misc RNA:
Total features: 4,415
Total number of protein coding genes annotated/found:
4,342
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Items 21 - 40
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5047|JADGLP010000001.1
SEQF5047_00041
Genome Viewer
NA
AA
945/315
43453-44397
hypothetical protein
SEQF5047|JADGLP010000001.1
SEQF5047_00042
Genome Viewer
NA
AA
1065/355
44453-45517
hypothetical protein
SEQF5047|JADGLP010000001.1
SEQF5047_00043
Genome Viewer
NA
AA
1290/430
45704-46993
hypothetical protein
SEQF5047|JADGLP010000001.1
SEQF5047_00045
Genome Viewer
NA
AA
183/61
47777-47595
hypothetical protein
SEQF5047|JADGLP010000001.1
SEQF5047_00047
Genome Viewer
NA
AA
882/294
49273-48392
hypothetical protein
SEQF5047|JADGLP010000001.1
SEQF5047_00049
Genome Viewer
NA
AA
657/219
50068-50724
hypothetical protein
SEQF5047|JADGLP010000001.1
SEQF5047_00052
Genome Viewer
NA
AA
135/45
52632-52766
hypothetical protein
SEQF5047|JADGLP010000001.1
SEQF5047_00053
Genome Viewer
NA
AA
861/287
52773-53633
hypothetical protein
SEQF5047|JADGLP010000001.1
SEQF5047_00055
Genome Viewer
NA
AA
1356/452
54865-56220
Putative zinc metalloprotease
SEQF5047|JADGLP010000001.1
SEQF5047_00058
Genome Viewer
NA
AA
279/93
59661-59383
hypothetical protein
SEQF5047|JADGLP010000001.1
SEQF5047_00059
Genome Viewer
NA
AA
657/219
59958-60614
hypothetical protein
SEQF5047|JADGLP010000001.1
SEQF5047_00060
Genome Viewer
NA
AA
102/34
60862-60761
hypothetical protein
SEQF5047|JADGLP010000001.1
SEQF5047_00061
Genome Viewer
NA
AA
363/121
61264-60902
hypothetical protein
SEQF5047|JADGLP010000001.1
SEQF5047_00062
Genome Viewer
NA
AA
507/169
61816-61310
hypothetical protein
SEQF5047|JADGLP010000002.1
SEQF5047_00063
Genome Viewer
NA
AA
861/287
1056-196
hypothetical protein
SEQF5047|JADGLP010000002.1
SEQF5047_00064
Genome Viewer
NA
AA
438/146
1515-1078
hypothetical protein
SEQF5047|JADGLP010000002.1
SEQF5047_00065
Genome Viewer
NA
AA
1275/425
3004-1730
hypothetical protein
SEQF5047|JADGLP010000002.1
SEQF5047_00070
Genome Viewer
NA
AA
519/173
10767-10249
hypothetical protein
SEQF5047|JADGLP010000002.1
SEQF5047_00072
Genome Viewer
NA
AA
420/140
12296-11877
hypothetical protein
SEQF5047|JADGLP010000002.1
SEQF5047_00073
Genome Viewer
NA
AA
1404/468
13699-12296
hypothetical protein
🡄
Items 21 - 40
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Genome Viewer
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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